Eirin Lopez, Jose

Jose Eirin Lopez
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Positions

Assistant Professor, Biological Sciences , College of Arts, Sciences & Education

Contact Info

jeirinlo@fiu.edu

selected publications

Article
- 2017
  
  Basic surface features of nuclear FKBPs facilitate chromatin binding. SCIENTIFIC REPORTS. 7.
  Full Text via DOI: 10.1038/s41598-017-04194-7 PMID: 28630422 Web of Science: 000403650300038
- 2017
  
  Detection of invasive and cryptic species in marine mussels (Bivalvia, Mytilidae): A chromosomal perspective. JOURNAL FOR NATURE CONSERVATION. 39:58-67.
  Full Text via DOI: 10.1016/j.jnc.2017.07.005 Web of Science: 000410880400003
- 2017
  
  Effects of Florida Red Tides on histone variant expression and DNA methylation in the Eastern oyster Crassostrea virginica. AQUATIC TOXICOLOGY. 186:196-204.
  Full Text via DOI: 10.1016/j.aquatox.2017.03.006 PMID: 28315825 Web of Science: 000401386100020
- 2017
  
  Molecular and Biochemical Methods Useful for the Epigenetic Characterization of Chromatin-Associated Proteins in Bivalve Molluscs. FRONTIERS IN PHYSIOLOGY. 8.
  Full Text via DOI: 10.3389/fphys.2017.00490 PMID: 28848447 Web of Science: 000407608200001
- 2016
  
  Characterization of mussel H2AZ2: a new H2A.Z variant preferentially expressed in germinal tissues from Mytilus. BIOCHEMISTRY AND CELL BIOLOGY. 94:480-490.
  Full Text via DOI: 10.1139/bcb-2016-0056 PMID: 27617756 Web of Science: 000386056700011
- 2016
  
  Early Genotoxic and Cytotoxic Effects of the Toxic Dinoflagellate Prorocentrum lima in the Mussel Mytilus galloprovincialis. TOXINS. 8.
  Full Text via DOI: 10.3390/toxins8060159 Web of Science: 000378808700002
- 2016
  
  The characterization of macroH2A beyond vertebrates supports an ancestral origin and conserved role for histone variants in chromatin. EPIGENETICS. 11:415-425.
  Full Text via DOI: 10.1080/15592294.2016.1172161 PMID: 27082816 Web of Science: 000380902700003
- 2016
  
  Unique yeast histone sequences influence octamer and nucleosome stability. FEBS LETTERS. 590:2629-2638.
  Full Text via DOI: 10.1002/1873-3468.12266 PMID: 27339085 Web of Science: 000383600300014
- 2015
  
  An Unusual Role for doublesex in Sex Determination in the Dipteran Sciara. GENETICS. 200:1181-+.
  Full Text via DOI: 10.1534/genetics.115.177972 PMID: 26063659 Web of Science: 000359917000017
- 2015
  
  Evolution of High Mobility Group Nucleosome-Binding Proteins and Its Implications for Vertebrate Chromatin Specialization. MOLECULAR BIOLOGY AND EVOLUTION. 32:121-131.
  Full Text via DOI: 10.1093/molbev/msu280 PMID: 25281808 Web of Science: 000350050200011
- 2015
  
  IN VITRO ANALYSIS OF EARLY GENOTOXIC AND CYTOTOXIC EFFECTS OF OKADAIC ACID IN DIFFERENT CELL TYPES OF THE MUSSEL Mytilus galloprovincialis. JOURNAL OF TOXICOLOGY AND ENVIRONMENTAL HEALTH-PART A-CURRENT ISSUES. 78:814-824.
  Full Text via DOI: 10.1080/15287394.2015.1051173 PMID: 26167748 Web of Science: 000357938400004
- 2015
  
  The comparative study of five sex-determining proteins across insects unveils high rates of evolution at basal components of the sex determination cascade. DEVELOPMENT GENES AND EVOLUTION. 225:23-30.
  Full Text via DOI: 10.1007/s00427-015-0491-6 PMID: 25613749 Web of Science: 000349029300003
- 2015
  
  Unbiased high-throughput characterization of mussel transcriptomic responses to sublethal concentrations of the biotoxin okadaic acid. PEERJ. 3.
  Full Text via DOI: 10.7717/peerj.1429 PMID: 26618092 Web of Science: 000365803400013
- 2013
  
  A computer lab exploring evolutionary aspects of chromatin structure and dynamics for an undergraduate chromatin course*. BIOCHEMISTRY AND MOLECULAR BIOLOGY EDUCATION. 41:95-102.
  Full Text via DOI: 10.1002/bmb.20667 PMID: 23401152 Web of Science: 000316694400006
- 2013
  
  The CHROMEVALOA Database: A Resource for the Evaluation of Okadaic Acid Contamination in the Marine Environment Based on the Chromatin-Associated Transcriptome of the Mussel Mytilus galloprovincialis. MARINE DRUGS. 11:830-841.
  Full Text via DOI: 10.3390/md11030830 PMID: 23481679 Web of Science: 000316607800016
Meeting Abstract
- 2017
  
  Characterization of epigenetic marks in marine invertebrates. BIOCHEMISTRY AND CELL BIOLOGY. 181-181.
  Web of Science: 000399165600012
- 2017
  
  First in vivo characterization of macroH2A beyond vertebrates: new insights into the functional evolution of histone variants. BIOCHEMISTRY AND CELL BIOLOGY. 180-180.
  Web of Science: 000399165600010
- 2017
  
  Framing epigenetic signatures of the Pacific oyster under environmental stress using network analysis. BIOCHEMISTRY AND CELL BIOLOGY. 184-184.
  Web of Science: 000399165600025
Proceedings Paper
- 2013
  
  Clustering of Gene Expression Profiles Applied to Marine Research. ADVANCES IN COMPUTATIONAL INTELLIGENCE, PT I. 453-+.
  Web of Science: 000324897700045
Review
- 2015
  
  Environmental epigenetics: A promising venue for developing next-generation pollution biomonitoring tools in marine invertebrates. MARINE POLLUTION BULLETIN. 5-13.
  Full Text via DOI: 10.1016/j.marpolbul.2015.06.020 PMID: 26088539 Web of Science: 000362134100014
- 2013
  
  Bivalve Omics: State of the Art and Potential Applications for the Biomonitoring of Harmful Marine Compounds. MARINE DRUGS. 4370-4389.
  Full Text via DOI: 10.3390/md11114370 PMID: 24189277 Web of Science: 000330521400015
- 2013
  
  Okadaic Acid Meet and Greet: An Insight into Detection Methods, Response Strategies and Genotoxic Effects in Marine Invertebrates. MARINE DRUGS. 2829-2845.
  Full Text via DOI: 10.3390/md11082829 PMID: 23939476 Web of Science: 000330521300010

chaired theses and dissertations

Ulloa, Maria Victoria Suarez, Transcriptomic and Epigenetic Responses to Environmental Stress in Marine Bivalves with a Focus on Harmful Algal Blooms 2017

advised honors theses

Michel, Michelot, Characterization of DNA methylation in the Flat tree oyster (Isognomon alatus) and its correlation with environmental abiotic factors 2017

principal investigator on

RAPID: COLLABORATIVE RESEARCH: Interaction between genotype and acquired environmental modifications during coral responses to extreme climatic events Irma and Maria awarded by National Science Foundation 2017 - 2019

teaching activities

BSC3941-B55: Biological Sciences Research Internship Fall Term 2019
BSC3941-B55: Biological Sciences Research Internship Spring Term 2019
BSC5935-B51: Topics In Biology Spring Term 2019
BSC5935-U01: Topics In Biology Spring Term 2019
BSC6913-B54: Student Research Lab Fall Term 2019
BSC6913-B54: Student Research Lab Spring Term 2019
PCB4674-BHA: Evolution Fall Term 2019

full name

Jose Eirin Lopez

ORCID iD

https://orcid.org/0000-0002-8041-9770 (confirmed)

visualizations

Recent publications and grants in Scholars@FIU

Co-author Network

Co-investigator Network

publication subject areas

Biochemistry & Molecular Biology
Biodiversity & Conservation
Biophysics
Cell Biology
Developmental Biology
Education & Educational Research
Environmental Sciences & Ecology
Evolutionary Biology
Food Science & Technology
Genetics & Heredity
Marine & Freshwater Biology
Pharmacology & Pharmacy
Physiology
Public, Environmental & Occupational Health
Science & Technology - Other Topics
Toxicology

Citation index-derived subject areas the researcher has published in